STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_44102-keto-3-deoxy-6-phosphogluconate aldolase. (209 aa)    
Predicted Functional Partners:
AZC_4409
Putative 2-keto-3-deoxy-galactonokinase.
  
 0.997
AZC_0561
2-dehydro-3-deoxyphosphogluconate aldolase protein.
  
  
 
0.854
zwf
Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
 
  
 0.722
AZC_0560
2-dehydro-3-deoxygluconokinase.
 
  
 0.718
AZC_4408
Amino acid ABC transporter ATP-binding protein.
  
    0.700
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
 
  
 0.542
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
   
 0.532
rhmD
L-alanine-DL-glutamate epimerase; Catalyzes the dehydration of L-rhamnonate to 2-keto-3-deoxy- L-rhamnonate (KDR).
 
   
 0.503
lacI-6
Transcriptional regulator; LacI family.
 
  
 0.493
glk
Glucokinase; Belongs to the bacterial glucokinase family.
  
  
 0.481
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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