STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4416Putative sugar transferases; Involved in lipopolysaccharide synthesis precursor. (471 aa)    
Predicted Functional Partners:
AZC_0057
GDP-mannose 1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.868
AZC_4424
Putative membrane protein; Involved in the export of O-antigen and teichoic acid.
 
  
 0.779
AZC_4422
Putative periplasmic protein; Involved in polysaccharide export.
 
  
 0.768
AZC_4423
Putative uncharacterized protein; Involved in exopolysaccharide biosynthesis.
 
  
 0.721
AZC_4637
Putative membrane protein; ExoQ family, involved in exopolysaccharide production.
 
  
 0.708
AZC_4621
Hypothetical protein.
 
  
 0.698
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.687
AZC_3470
Perosamine synthetase; Belongs to the DegT/DnrJ/EryC1 family.
  
 0.646
AZC_4629
Periplasmic protein; Involved in polysaccharide export.
 
  
 0.630
AZC_3113
Putative glycosyltransferase.
 
  
 0.629
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.