STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4422Putative periplasmic protein; Involved in polysaccharide export. (332 aa)    
Predicted Functional Partners:
AZC_4423
Putative uncharacterized protein; Involved in exopolysaccharide biosynthesis.
 
 
 0.957
AZC_4421
Glycosyltransferase; WecB/TagA/CpsF; Belongs to the glycosyltransferase 26 family.
 
   
 0.910
AZC_4424
Putative membrane protein; Involved in the export of O-antigen and teichoic acid.
 
  
 0.804
AZC_4416
Putative sugar transferases; Involved in lipopolysaccharide synthesis precursor.
 
  
 0.768
AZC_4626
Putative intercellular adhesion protein A.
 
  
 0.750
fkbM-6
Methyltransferase.
 
     0.719
AZC_0057
GDP-mannose 1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
  
 0.676
wzt
Putative ABC-2 transporter.
  
  
 0.665
AZC_0040
Putative capsule polysaccharide export inner-membrane protein.
  
  
 0.663
AZC_4420
Hypothetical protein.
       0.626
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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