STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4438Putative signal transduction protein; Containing a membrane domain, an EAL and a GGDEF domain. (443 aa)    
Predicted Functional Partners:
AZC_3902
Putative cylclic diguanylate phosphodiesterase; EAL precursor.
  
 0.850
AZC_0617
Two-component system response regulator.
  
 0.844
AZC_4658
Conserved putative membrane protein.
 
 0.838
AZC_3085
Hypothetical 80.5 kDa protein in ntrC 5'region.
 
 0.835
AZC_2507
EAL domain protein.
  
 0.831
AZC_1222
Hypothetical protein; EAL domain.
  
 0.814
AZC_0308
Putative diguanylate cyclase; GGDEF, phosphodiesterase.
 
  
 0.813
AZC_0914
Metal-dependent phosphohydrolase; HD subdomain.
 
 0.730
AZC_4439
Hypothetical protein.
       0.564
AZC_4679
Proble transcriptional regulator.
  
 
 0.558
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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