Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AZC_2241 | AZC_4070 | AZC_2241 | AZC_4070 | Ribosomal-protein-alanine N-acetyltransferase. | Periplasmic sensor signal transduction histidine kinase. | 0.632 |
AZC_2241 | AZC_4462 | AZC_2241 | AZC_4462 | Ribosomal-protein-alanine N-acetyltransferase. | Protein of unknown function; DUF1223. | 0.559 |
AZC_4070 | AZC_2241 | AZC_4070 | AZC_2241 | Periplasmic sensor signal transduction histidine kinase. | Ribosomal-protein-alanine N-acetyltransferase. | 0.632 |
AZC_4070 | AZC_4462 | AZC_4070 | AZC_4462 | Periplasmic sensor signal transduction histidine kinase. | Protein of unknown function; DUF1223. | 0.663 |
AZC_4070 | AZC_4673 | AZC_4070 | AZC_4673 | Periplasmic sensor signal transduction histidine kinase. | Protein of unknown function; DUF1674. | 0.484 |
AZC_4461 | AZC_4462 | AZC_4461 | AZC_4462 | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Protein of unknown function; DUF1223. | 0.741 |
AZC_4461 | AZC_4463 | AZC_4461 | AZC_4463 | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Hypothetical protein. | 0.416 |
AZC_4461 | ccmA | AZC_4461 | AZC_4460 | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | Heme exporter protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.610 |
AZC_4462 | AZC_2241 | AZC_4462 | AZC_2241 | Protein of unknown function; DUF1223. | Ribosomal-protein-alanine N-acetyltransferase. | 0.559 |
AZC_4462 | AZC_4070 | AZC_4462 | AZC_4070 | Protein of unknown function; DUF1223. | Periplasmic sensor signal transduction histidine kinase. | 0.663 |
AZC_4462 | AZC_4461 | AZC_4462 | AZC_4461 | Protein of unknown function; DUF1223. | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.741 |
AZC_4462 | AZC_4463 | AZC_4462 | AZC_4463 | Protein of unknown function; DUF1223. | Hypothetical protein. | 0.763 |
AZC_4462 | AZC_4673 | AZC_4462 | AZC_4673 | Protein of unknown function; DUF1223. | Protein of unknown function; DUF1674. | 0.427 |
AZC_4462 | ccmA | AZC_4462 | AZC_4460 | Protein of unknown function; DUF1223. | Heme exporter protein; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family. | 0.638 |
AZC_4463 | AZC_4461 | AZC_4463 | AZC_4461 | Hypothetical protein. | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.416 |
AZC_4463 | AZC_4462 | AZC_4463 | AZC_4462 | Hypothetical protein. | Protein of unknown function; DUF1223. | 0.763 |
AZC_4463 | AZC_4673 | AZC_4463 | AZC_4673 | Hypothetical protein. | Protein of unknown function; DUF1674. | 0.681 |
AZC_4673 | AZC_4070 | AZC_4673 | AZC_4070 | Protein of unknown function; DUF1674. | Periplasmic sensor signal transduction histidine kinase. | 0.484 |
AZC_4673 | AZC_4462 | AZC_4673 | AZC_4462 | Protein of unknown function; DUF1674. | Protein of unknown function; DUF1223. | 0.427 |
AZC_4673 | AZC_4463 | AZC_4673 | AZC_4463 | Protein of unknown function; DUF1674. | Hypothetical protein. | 0.681 |
page 1 of 2