STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4507Major facilitator superfamily (MFS) transporter. (480 aa)    
Predicted Functional Partners:
arsR-5
Regulatory protein.
     
 0.796
arsR-4
Regulatory protein.
     
 0.794
arsR
Transcriptional regulatory protein; ArsR family.
     
 0.793
arsR-2
Regulatory protein.
     
 0.793
arsR-3
Transcriptional regulator; ArsR family.
     
 0.793
AZC_2214
ATP-binding component of ABC transporter.
      
 0.790
AZC_4506
Unknown protein.
       0.773
AZC_4508
Conserved hypothetical protein; Glu/Leu/Phe/Val dehydrogenase.
       0.676
AZC_4326
Penicillin-insensitive murein endopeptidase precursor; Peptidase U6.
      0.590
clpX
ATP-dependent Clp protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.
     
 0.535
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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