STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4522Nitrate ABC transporter permease protein. (378 aa)    
Predicted Functional Partners:
AZC_4521
ABC transporter ATP-binding protein.
  
 0.996
AZC_4520
Putative efflux protein.
  
 0.955
AZC_0240
ABC-type multidrug transport system; ATPase component.
 
  
 0.916
nodI
Nod factor export ATP-binding protein I; Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4- linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system.
 
  
 0.889
AZC_3926
Putative ABC transporter ATP-binding protein in ntrA/rpoN 5'region; Belongs to the ABC transporter superfamily.
   
 0.868
AZC_2214
ATP-binding component of ABC transporter.
      0.838
AZC_4519
Transcriptional regulatory protein.
 
     0.818
AZC_1801
ABC opine/polyamine transporter ATPase subunit; Belongs to the ABC transporter superfamily.
 
   
  0.773
AZC_1641
Unknown protein.
 
  
 0.771
hlyD-10
Secretion protein precursor; HlyD family.
  
 0.711
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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