STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4589ABC transporter ATP-binding protein. (294 aa)    
Predicted Functional Partners:
AZC_4588
AMP-dependent synthetase and ligase.
    0.956
AZC_4586
ABC-type branched-chain amino acid transport system permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.947
AZC_0198
ABC branched chain amino acid family transporter; Inner membrane subunit; Belongs to the binding-protein-dependent transport system permease family.
  
 0.925
AZC_3193
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.925
AZC_2111
Amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.899
AZC_4077
Amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.893
AZC_2870
ABC-type branched-chain amino acid transport permease component; Belongs to the binding-protein-dependent transport system permease family.
  
 0.880
AZC_4587
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.875
AZC_4515
Putative ABC transporter, permease protein precursor; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.869
AZC_3002
ABC transport permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
 0.857
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.