STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4638Putative glycosyltransferase. (369 aa)    
Predicted Functional Partners:
AZC_4637
Putative membrane protein; ExoQ family, involved in exopolysaccharide production.
 
  
 0.850
AZC_4636
Putative glycosyltransferase.
 
     0.825
AZC_4626
Putative intercellular adhesion protein A.
  
 0.782
AZC_4621
Hypothetical protein.
 
  
 0.710
AZC_4629
Periplasmic protein; Involved in polysaccharide export.
 
  
 0.709
AZC_4631
Putative polysaccharide export protein.
 
  
 0.632
AZC_1522
NAD-dependent epimerase; Dehydratase.
 
    0.607
AZC_1962
Putative short-chain dehydrogenase.
 
    0.606
pyrE
Orotate phosphoribosyl transferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
     
 0.576
AZC_4371
Putative short-chain dehydrogenase.
 
    0.556
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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