STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uspA-2UspA protein. (167 aa)    
Predicted Functional Partners:
AZC_1532
Putative transmembrane protein precursor.
 
     0.803
AZC_1533
Putative permease.
 
   
 0.796
AZC_4679
Proble transcriptional regulator.
  
  
 0.740
AZC_3681
Hypothetical protein.
  
     0.682
AZC_4678
Unknown protein.
       0.621
AZC_4681
Putative glyoxalase protein.
  
  
 0.597
AZC_3685
Protein of unknown function; DUF540.
  
     0.538
AZC_3098
Putative ATPase.
  
  
 0.528
AZC_3923
Response regulator receiver; ATP-binding region, histidine kinase A, N-terminal precursor.
 
   
 0.519
AZC_0368
Conserved hypothetical protein; Disulphide bond formation protein DsbB.
  
     0.511
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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