STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AZC_4691Intracellular polyhydroxyalkanoate depolymerase. (451 aa)    
Predicted Functional Partners:
phbC
Poly-beta-hydroxybutyrate polymerase; Polymerizes D(-)-3-hydroxybutyryl-CoA to create PHB which consists of thousands of hydroxybutyrate molecules linked end to end. PHB serves as an intracellular energy reserve material when cells grow under conditions of nutrient limitation; Belongs to the PHA/PHB synthase family. Type I PhaC subfamily.
 
  
 0.971
AZC_4082
Poly-beta-hydroxybutyrate polymerase; Alpha/beta hydrolase fold.
 
  
 0.964
AZC_0295
Polyhydroxyalkanoate depolymerase.
  
  
 
0.906
phaR
Polyhydroxyalkanoate synthesis repressor.
 
   
 0.568
AZC_4692
Histidine kinase A; ATPase-like ATP-binding region.
       0.535
AZC_4690
Protein of unknown function; DUF45.
       0.466
AZC_4577
3-hydroxybutyrate dehydrogenase.
  
   
 0.459
AZC_1593
Uncharacterized conserved protein.
  
   
 0.450
AZC_0699
Pyruvate ferredoxin/flavodoxin oxidoreductase.
 
     0.429
AZC_4693
Transcriptional regulator; Helix-turn-helix, Fis-type.
       0.425
Your Current Organism:
Azorhizobium caulinodans
NCBI taxonomy Id: 438753
Other names: A. caulinodans ORS 571, Azorhizobium caulinodans ORS 571, Azorhizobium caulinodans str. ORS 571, Azorhizobium caulinodans strain ORS 571, Rhizobium sp. ORS 571
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