STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB19147.1Putative ABC transport system ATP-binding protein. (233 aa)    
Predicted Functional Partners:
SDB19134.1
Putative ABC transport system permease protein.
 
  0.981
SDB28159.1
Putative ABC transport system permease protein.
 
  0.959
SDB22727.1
Putative ABC transport system permease protein.
 
 
0.656
SDB07336.1
Hypothetical protein.
   
  0.636
SDB30212.1
Putative ABC transport system permease protein.
   
  0.636
SDB23320.1
Putative ABC transport system permease protein.
   
  0.612
SDB23377.1
Putative ABC transport system permease protein.
   
  0.612
SDB35333.1
Putative ABC transport system permease protein.
 
 
  0.612
SDB28187.1
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.603
SDB19160.1
Transcriptional regulator, TetR family.
   
   0.598
Your Current Organism:
Streptococcus henryi
NCBI taxonomy Id: 439219
Other names: DSM 19005, S. henryi, Streptococcus henryi Milinovich et al. 2008, strain 126
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