STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB24910.1Two-component system, AgrA family, sensor histidine kinase AgrC. (440 aa)    
Predicted Functional Partners:
SDB24894.1
Two component transcriptional regulator, LytTR family.
 
 
 0.972
SDB20915.1
Two component transcriptional regulator, LytTR family.
 
 
 0.878
SDB23820.1
Two component transcriptional regulator, LytTR family.
 
 
 0.878
SDB24877.1
LytTr DNA-binding domain-containing protein.
  
 
 0.649
SDB23259.1
Ribose transport system substrate-binding protein.
  
   0.545
SDB27437.1
Ribose transport system substrate-binding protein.
  
   0.545
SDB43504.1
Ribose transport system substrate-binding protein.
  
   0.545
SDB39229.1
LytTr DNA-binding domain-containing protein.
 
 
 0.528
SDB38172.1
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
  
 
 0.442
SDB24929.1
Hypothetical protein.
       0.436
Your Current Organism:
Streptococcus henryi
NCBI taxonomy Id: 439219
Other names: DSM 19005, S. henryi, Streptococcus henryi Milinovich et al. 2008, strain 126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.