Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDB03627.1 | SDB25103.1 | SAMN02910293_00166 | SAMN02910293_01252 | Hypothetical protein. | Hypothetical protein. | 0.642 |
SDB07262.1 | SDB25090.1 | SAMN02910293_00359 | SAMN02910293_01251 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | Hypothetical protein. | 0.537 |
SDB07262.1 | SDB25103.1 | SAMN02910293_00359 | SAMN02910293_01252 | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | Hypothetical protein. | 0.519 |
SDB25072.1 | SDB25090.1 | SAMN02910293_01250 | SAMN02910293_01251 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.643 |
SDB25072.1 | SDB25103.1 | SAMN02910293_01250 | SAMN02910293_01252 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hypothetical protein. | 0.593 |
SDB25072.1 | SDB25122.1 | SAMN02910293_01250 | SAMN02910293_01253 | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Hexapeptide repeat of succinyl-transferase. | 0.604 |
SDB25090.1 | SDB07262.1 | SAMN02910293_01251 | SAMN02910293_00359 | Hypothetical protein. | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.537 |
SDB25090.1 | SDB25072.1 | SAMN02910293_01251 | SAMN02910293_01250 | Hypothetical protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.643 |
SDB25090.1 | SDB25103.1 | SAMN02910293_01251 | SAMN02910293_01252 | Hypothetical protein. | Hypothetical protein. | 0.924 |
SDB25090.1 | SDB25122.1 | SAMN02910293_01251 | SAMN02910293_01253 | Hypothetical protein. | Hexapeptide repeat of succinyl-transferase. | 0.786 |
SDB25090.1 | SDB25142.1 | SAMN02910293_01251 | SAMN02910293_01254 | Hypothetical protein. | Catechol 2,3-dioxygenase. | 0.433 |
SDB25103.1 | SDB03627.1 | SAMN02910293_01252 | SAMN02910293_00166 | Hypothetical protein. | Hypothetical protein. | 0.642 |
SDB25103.1 | SDB07262.1 | SAMN02910293_01252 | SAMN02910293_00359 | Hypothetical protein. | NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. | 0.519 |
SDB25103.1 | SDB25072.1 | SAMN02910293_01252 | SAMN02910293_01250 | Hypothetical protein. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.593 |
SDB25103.1 | SDB25090.1 | SAMN02910293_01252 | SAMN02910293_01251 | Hypothetical protein. | Hypothetical protein. | 0.924 |
SDB25103.1 | SDB25122.1 | SAMN02910293_01252 | SAMN02910293_01253 | Hypothetical protein. | Hexapeptide repeat of succinyl-transferase. | 0.758 |
SDB25103.1 | SDB25142.1 | SAMN02910293_01252 | SAMN02910293_01254 | Hypothetical protein. | Catechol 2,3-dioxygenase. | 0.433 |
SDB25103.1 | SDB29718.1 | SAMN02910293_01252 | SAMN02910293_01494 | Hypothetical protein. | Ribosomal protein S18 acetylase RimI. | 0.404 |
SDB25122.1 | SDB25072.1 | SAMN02910293_01253 | SAMN02910293_01250 | Hexapeptide repeat of succinyl-transferase. | DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.604 |
SDB25122.1 | SDB25090.1 | SAMN02910293_01253 | SAMN02910293_01251 | Hexapeptide repeat of succinyl-transferase. | Hypothetical protein. | 0.786 |
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