Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDB18976.1 | SDB32228.1 | SAMN02910293_00971 | SAMN02910293_01597 | Glutamine synthetase. | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.554 |
SDB18976.1 | SDB32311.1 | SAMN02910293_00971 | SAMN02910293_01602 | Glutamine synthetase. | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.745 |
SDB18976.1 | SDB39504.1 | SAMN02910293_00971 | SAMN02910293_01945 | Glutamine synthetase. | Glyceraldehyde-3-phosphate dehydrogenase (NADP+). | 0.554 |
SDB18976.1 | argD | SAMN02910293_00971 | SAMN02910293_01677 | Glutamine synthetase. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.782 |
SDB18976.1 | proA | SAMN02910293_00971 | SAMN02910293_02006 | Glutamine synthetase. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.734 |
SDB18976.1 | proB | SAMN02910293_00971 | SAMN02910293_02005 | Glutamine synthetase. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.719 |
SDB32228.1 | SDB18976.1 | SAMN02910293_01597 | SAMN02910293_00971 | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamine synthetase. | 0.554 |
SDB32228.1 | SDB32311.1 | SAMN02910293_01597 | SAMN02910293_01602 | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.601 |
SDB32228.1 | argD | SAMN02910293_01597 | SAMN02910293_01677 | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.634 |
SDB32228.1 | proA | SAMN02910293_01597 | SAMN02910293_02006 | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.533 |
SDB32228.1 | proB | SAMN02910293_01597 | SAMN02910293_02005 | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.534 |
SDB32228.1 | proC | SAMN02910293_01597 | SAMN02910293_01171 | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.536 |
SDB32311.1 | SDB18976.1 | SAMN02910293_01602 | SAMN02910293_00971 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamine synthetase. | 0.745 |
SDB32311.1 | SDB32228.1 | SAMN02910293_01602 | SAMN02910293_01597 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.601 |
SDB32311.1 | SDB39504.1 | SAMN02910293_01602 | SAMN02910293_01945 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glyceraldehyde-3-phosphate dehydrogenase (NADP+). | 0.601 |
SDB32311.1 | argD | SAMN02910293_01602 | SAMN02910293_01677 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.417 |
SDB32311.1 | proA | SAMN02910293_01602 | SAMN02910293_02006 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family. | 0.714 |
SDB32311.1 | proB | SAMN02910293_01602 | SAMN02910293_02005 | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate. | 0.713 |
SDB39504.1 | SDB18976.1 | SAMN02910293_01945 | SAMN02910293_00971 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+). | Glutamine synthetase. | 0.554 |
SDB39504.1 | SDB32311.1 | SAMN02910293_01945 | SAMN02910293_01602 | Glyceraldehyde-3-phosphate dehydrogenase (NADP+). | Glutamate dehydrogenase (NADP+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.601 |
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