STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB42829.1Ferredoxin. (65 aa)    
Predicted Functional Partners:
SDB04950.1
Phosphate acetyltransferase.
    
 0.684
SDB04363.1
Citrate synthase; Belongs to the citrate synthase family.
     
 0.678
SDB14648.1
Acetolactate synthase, large subunit.
     
 0.677
SDB10746.1
Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase.
     
 0.669
leuC
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
     
 0.666
cmk
Cytidylate kinase.
  
  
 0.636
SDB42841.1
Hypothetical protein.
       0.614
infC
Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.
     
 0.471
SDB32228.1
Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
 
  0.463
SDB39504.1
Glyceraldehyde-3-phosphate dehydrogenase (NADP+).
   
 
  0.463
Your Current Organism:
Streptococcus henryi
NCBI taxonomy Id: 439219
Other names: DSM 19005, S. henryi, Streptococcus henryi Milinovich et al. 2008, strain 126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.