STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDB44872.1DNA-binding transcriptional regulator, XRE-family HTH domain. (104 aa)    
Predicted Functional Partners:
SDB44858.1
Phage replication initiation protein.
 
   
 0.819
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
 0.724
SDB44886.1
Hypothetical protein.
       0.714
SDB44900.1
Hypothetical protein.
       0.714
SDB44911.1
Hypothetical protein.
       0.664
SDB44923.1
Hypothetical protein.
       0.646
SDB44966.1
AAA-like domain-containing protein.
 
     0.626
SDB44932.1
Hypothetical protein.
       0.585
SDB44976.1
Hypothetical protein.
 
     0.577
SDB44942.1
Conjugative transposon protein TcpC.
       0.566
Your Current Organism:
Streptococcus henryi
NCBI taxonomy Id: 439219
Other names: DSM 19005, S. henryi, Streptococcus henryi Milinovich et al. 2008, strain 126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.