STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_0080TIGRFAM: conserved repeat domain protein; PFAM: protein of unknown function DUF1566; KEGG: sus:Acid_3175 hypothetical protein; IMG reference gene:2503005775; PFAM: Beta-propeller repeat; Protein of unknown function (DUF1566); Domain of unknown function DUF11; TIGRFAM: conserved repeat domain. (1409 aa)    
Predicted Functional Partners:
Dalk_2289
PFAM: PKD domain containing protein; NHL repeat containing protein; SMART: LamG domain protein jellyroll fold domain protein; KEGG: mac:MA4315 cell surface protein; IMG reference gene:2503008009; PFAM: NHL repeat; PKD domain.
 
 
 0.837
Dalk_1092
KEGG: swd:Swoo_2503 hypothetical protein; IMG reference gene:2503006793.
  
 0.827
Dalk_2500
PFAM: peptidase C11 clostripain; SMART: Fibronectin type III domain protein; KEGG: rca:Rcas_2277 peptidase C11 clostripain; IMG reference gene:2503008221; PFAM: Clostripain family.
  
 0.827
Dalk_2501
PFAM: peptidase C11 clostripain; SMART: Fibronectin type III domain protein; KEGG: rca:Rcas_2277 peptidase C11 clostripain; IMG reference gene:2503008222; PFAM: Clostripain family.
  
 0.827
Dalk_2502
PFAM: peptidase C11 clostripain; KEGG: rca:Rcas_2277 peptidase C11 clostripain; IMG reference gene:2503008223; PFAM: Clostripain family.
  
 0.827
Dalk_0427
PFAM: polysaccharide export protein; KEGG: dps:DPPB86 related to capsular polysaccharide export protein; IMG reference gene:2503006126; PFAM: Polysaccharide biosynthesis/export protein; SLBB domain.
  
  
 0.786
Dalk_2491
PFAM: OmpA/MotB domain protein; SMART: von Willebrand factor type A; KEGG: sat:SYN_00198 outer membrane porin protein; IMG reference gene:2503008212; PFAM: von Willebrand factor type A domain; OmpA family.
   
 0.771
Dalk_0230
PFAM: OmpA/MotB domain protein; KEGG: sat:SYN_00198 outer membrane porin protein; IMG reference gene:2503005926; PFAM: von Willebrand factor type A domain; OmpA family.
   
 0.758
Dalk_0231
PFAM: protein of unknown function DUF748; KEGG: dar:Daro_1599 hypothetical protein; IMG reference gene:2503005927; PFAM: Domain of Unknown Function (DUF748).
   
 0.758
Dalk_0310
OmpA/MotB domain protein; PFAM: von Willebrand factor type A; OmpA/MotB domain protein; KEGG: sat:SYN_00198 outer membrane porin protein; IMG reference gene:2503006007; PFAM: von Willebrand factor type A domain; OmpA family.
   
 0.758
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.