Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Dalk_0100PFAM: Phosphoglycerate mutase; KEGG: dol:Dole_1922 phosphoglycerate mutase; IMG reference gene:2503005795; PFAM: Phosphoglycerate mutase family. (236 aa)    
Predicted Functional Partners:
Dalk_4323
PFAM: Strictosidine synthase; SMP-30/Gluconolaconase/LRE domain protein; KEGG: amr:AM1_E0184 strictosidine synthase family protein; IMG reference gene:2503010071; PFAM: Strictosidine synthase.
 
 
 0.796
Dalk_2469
PFAM: aminoglycoside phosphotransferase; KEGG: dol:Dole_1459 aminoglycoside phosphotransferase; IMG reference gene:2503008190; PFAM: Phosphotransferase enzyme family.
 
    0.779
Dalk_2468
PFAM: aminoglycoside phosphotransferase; KEGG: dol:Dole_1459 aminoglycoside phosphotransferase; IMG reference gene:2503008189; PFAM: Phosphotransferase enzyme family.
 
    0.776
Dalk_4162
KEGG: pae:PA1293 hypothetical protein; IMG reference gene:2503009908; PFAM: SMP-30/Gluconolaconase/LRE-like region.
 
 
 0.768
Dalk_4854
3-Oxoacyl (acyl-carrier protein) reductase; Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; IMG reference gene:2503010612; PFAM: short chain dehydrogenase.
  
 
 0.738
Dalk_0455
TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: dol:Dole_1230 cobalamin 5'-phosphate synthase; IMG reference gene:2503006155; PFAM: Cobalamin-5-phosphate synthase; TIGRFAM: cobalamin 5'-phosphate synthase/cobalamin synthase.
  
 
 0.735
Dalk_3098
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dol:Dole_1918 short chain dehydrogenase; IMG reference gene:2503008827; PFAM: short chain dehydrogenase.
  
 
 0.719
Dalk_3029
KEGG: gur:Gura_0598 non-specific serine/threonine protein kinase; PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; IMG reference gene:2503008756; PFAM: SNF2 Helicase protein; Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
    
  0.718
Dalk_4695
TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: dol:Dole_0684 molybdenum cofactor synthesis domain-containing protein; IMG reference gene:2503010451; PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain.
    
  0.698
Dalk_3754
PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: dol:Dole_1918 short chain dehydrogenase; IMG reference gene:2503009498; PFAM: short chain dehydrogenase.
  
 
 0.693
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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