close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_0218PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mjl:Mjls_0019 protein phosphatase 2C domain-containing protein; IMG reference gene:2503005914; PFAM: Stage II sporulation protein E (SpoIIE). (235 aa)    
Predicted Functional Partners:
Dalk_0217
PFAM: cyclic nucleotide-binding; tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: mab:MAB_0033c serine/threonine-protein kinase PknB; IMG reference gene:2503005913; PFAM: Protein kinase domain; Cyclic nucleotide-binding domain.
 0.993
Dalk_2479
PFAM: cyclic nucleotide-binding; tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: azo:azo0988 putative serine/threonine protein kinase; IMG reference gene:2503008200; PFAM: Protein kinase domain; Cyclic nucleotide-binding domain.
 
 0.964
Dalk_3763
PFAM: cyclic nucleotide-binding; tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: azo:azo0988 putative serine/threonine protein kinase; IMG reference gene:2503009507; PFAM: Protein kinase domain; Cyclic nucleotide-binding domain.
 0.964
Dalk_2702
PFAM: Forkhead-associated protein; tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: mxa:MXAN_4700 serine/threonine protein kinase; IMG reference gene:2503008425; PFAM: Protein kinase domain; FHA domain.
 
 0.946
Dalk_0554
TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: dol:Dole_2231 sun protein; IMG reference gene:2503006255; PFAM: NOL1/NOP2/sun family; NusB family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB.
  
  
 0.925
Dalk_2700
PFAM: tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; Tetratricopeptide domain protein; KEGG: tte:TTE1500 serine/threonine protein kinase; IMG reference gene:2503008423; PFAM: Protein kinase domain.
 0.924
Dalk_2476
PFAM: tyrosine protein kinase; CHASE2 domain protein; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: dol:Dole_1367 serine/threonine protein kinase with CHASE2 sensor; IMG reference gene:2503008197; PFAM: Protein kinase domain; CHASE2 domain.
 
 0.923
Dalk_3762
Serine/threonine protein kinase; PFAM: protein of unknown function RIO1; tyrosine protein kinase; Metal-dependent hydrolase HDOD; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: dar:Daro_1602 protein kinase:GAF; IMG reference gene:2503009506; PFAM: Protein kinase domain; HDOD domain.
 
 0.916
Dalk_2962
PFAM: tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: hch:HCH_06862 serine/threonine protein kinase; IMG reference gene:2503008689; PFAM: Protein kinase domain.
 
 0.913
Dalk_3595
Serine/threonine protein kinase; PFAM: protein of unknown function RIO1; tyrosine protein kinase; Serine/threonine protein kinase-related; SMART: serine/threonine protein kinase; KEGG: cau:Caur_0486 protein kinase; IMG reference gene:2503009327; PFAM: Protein kinase domain.
 0.913
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.