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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_0331Hypothetical protein Dalk_0331; IMG reference gene:2503006028. (412 aa)    
Predicted Functional Partners:
Dalk_0332
PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: pca:Pcar_1478 metal-dependent phosphohydrolase, HD subdomain; IMG reference gene:2503006029; PFAM: HD domain.
       0.773
Dalk_0333
PFAM: Rieske [2Fe-2S] domain protein; KEGG: cts:Ctha_2405 Rieske (2Fe-2S) domain protein; IMG reference gene:2503006030; PFAM: Rieske [2Fe-2S] domain.
       0.773
Dalk_0334
KEGG: dol:Dole_0863 hypothetical protein; IMG reference gene:2503006031.
       0.527
Dalk_0335
KEGG: cpb:Cphamn1_2250 TfoX domain protein; IMG reference gene:2503006032; PFAM: TfoX C-terminal domain.
       0.460
Dalk_0330
PFAM: beta-lactamase domain protein; KEGG: dol:Dole_0028 beta-lactamase domain-containing protein; IMG reference gene:2503006027; PFAM: Metallo-beta-lactamase superfamily.
       0.442
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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