STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_0443PFAM: periplasmic binding protein; KEGG: dps:DP0217 Fe(III) ABC transporter, periplasmic substrate-binding protein; IMG reference gene:2503006143; PFAM: Periplasmic binding protein. (310 aa)    
Predicted Functional Partners:
Dalk_0442
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dps:DP0216 Fe(III) ABC transporter, ATP-binding protein; IMG reference gene:2503006142; PFAM: ABC transporter.
 
 0.993
Dalk_0441
PFAM: transport system permease protein; KEGG: dps:DP0215 Fe(III) ABC-transporter, permease protein; IMG reference gene:2503006141; PFAM: FecCD transport family.
 
 0.990
Dalk_5082
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA3642 iron ABC transporter, ATP-binding protein; IMG reference gene:2503010841; PFAM: ABC transporter.
 
 0.950
Dalk_0760
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sfu:Sfum_2739 ABC transporter related; IMG reference gene:2503006461; PFAM: ABC transporter.
 
 0.948
Dalk_3521
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mtp:Mthe_0432 ABC transporter related; IMG reference gene:2503009253; PFAM: ABC transporter.
 
 0.948
Dalk_4058
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ppd:Ppro_1258 ABC transporter related; IMG reference gene:2503009803; PFAM: ABC transporter.
 
 0.942
Dalk_0447
PFAM: nucleoside recognition domain protein; KEGG: dde:Dde_3102 hypothetical protein; IMG reference gene:2503006147.
     0.936
Dalk_5081
PFAM: transport system permease protein; KEGG: dde:Dde_1623 iron(III) dicitrate transport system permease protein; IMG reference gene:2503010840; PFAM: FecCD transport family.
 
 0.933
Dalk_0761
PFAM: transport system permease protein; KEGG: noc:Noc_0838 transport system permease protein; IMG reference gene:2503006462; PFAM: FecCD transport family.
 
 0.932
Dalk_3522
PFAM: transport system permease protein; KEGG: mtp:Mthe_0443 transport system permease protein; IMG reference gene:2503009254; PFAM: FecCD transport family.
 
 0.928
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.