STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_0606Sulfite reduction-associated complex, DsrK; KEGG: mta:Moth_1606 4Fe-4S ferredoxin, iron-sulfur binding; IMG reference gene:2503006307. (539 aa)    
Predicted Functional Partners:
Dalk_0605
Sulfite reduction-associated complex, DsrM; PFAM: Nitrate reductase gamma subunit; KEGG: mta:Moth_1602 nitrate reductase, gamma subunit; IMG reference gene:2503006306; PFAM: Nitrate reductase gamma subunit.
 
 
 0.967
Dalk_0607
Sulfite reduction-associated complex, DsrJ; KEGG: mta:Moth_1605 cytochrome c family protein; IMG reference gene:2503006308.
 
    0.967
Dalk_0609
Sulfite reduction-associated complex, DsrP; PFAM: Polysulphide reductase NrfD; KEGG: sfu:Sfum_1150 polysulphide reductase, NrfD; IMG reference gene:2503006310; PFAM: Polysulphide reductase, NrfD.
 
  
 0.961
Dalk_0608
Sulfite reduction-associated complex, DsrO; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dde:Dde_2274 reductase, iron-sulfur binding subunit, putative; IMG reference gene:2503006309; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence.
 
 
 0.958
Dalk_0604
KEGG: sfu:Sfum_1145 hypothetical protein; IMG reference gene:2503006305.
 
     0.941
Dalk_4144
Pyruvate-ferredoxin oxidoreductase, alpha subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; IMG reference gene:2503009890; PFAM: Domain of unknown function; domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin [...]
  
 
 0.909
Dalk_4301
KEGG: dol:Dole_2669 sulfite reductase, dissimilatory-type alpha subunit; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; IMG reference gene:2503010049; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase, dissimilatory-type alpha subunit.
 
 
 0.863
Dalk_4300
KEGG: dde:Dde_0527 sulfite reductase, dissimilatory-type beta subunit; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; IMG reference gene:2503010048; PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase, dissimilatory-type beta subunit.
 
 
 0.862
Dalk_1569
Adenylylsulfate reductase, alpha subunit; Catalyzes the reduction of adenosine 5'-phosphosulfate to AMP and sulfite; IMG reference gene:2503007279; PFAM: FAD binding domain; TIGRFAM: adenosine phosphosulphate reductase, alpha subunit.
 
 
 0.829
Dalk_4140
Dissimilatory sulfite reductase complex, associated protein DsrC; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family; PFAM: DsrC family protein; KEGG: dol:Dole_0463 DsrC family protein; IMG reference gene:2503009886; PFAM: DsrC like protein; TIGRFAM: sulfur relay protein, TusE/DsrC/DsvC family.
 
 
 
 0.827
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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