STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_0685Hydroxyethylthiazole kinase; Catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; IMG reference gene:2503006386; PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase. (268 aa)    
Predicted Functional Partners:
Dalk_0954
KEGG: dde:Dde_1379 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; IMG reference gene:2503006655; PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase.
 
 0.999
Dalk_2393
KEGG: mla:Mlab_0276 hypothetical protein; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase; IMG reference gene:2503008113; PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase.
 
 0.999
Dalk_0775
TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: sfu:Sfum_1692 phosphomethylpyrimidine kinase; IMG reference gene:2503006476; PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase.
 
 0.998
Dalk_2813
PFAM: isochorismatase hydrolase; KEGG: sat:SYN_02574 isochorismatase superfamily hydrolase; IMG reference gene:2503008537; PFAM: Isochorismatase family.
    
 0.883
Dalk_0686
TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: sfu:Sfum_1693 thiamine-monophosphate kinase; IMG reference gene:2503006387; PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase.
     
 0.792
Dalk_0439
Thiamine biosynthesis protein ThiC; Required for the synthesis of the hydromethylpyrimidine moiety of thiamine; IMG reference gene:2503006139; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC.
  
 
 0.771
Dalk_1103
PFAM: thiamine biosynthesis protein ThiC; KEGG: dol:Dole_2427 thiamine biosynthesis protein ThiC; IMG reference gene:2503006804; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC.
  
 
 0.771
Dalk_0684
KEGG: dsy:DSY2558 hypothetical protein; IMG reference gene:2503006385.
       0.689
Dalk_3312
KEGG: dol:Dole_2079 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein; IMG reference gene:2503009042; PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD.
      
 0.616
Dalk_0687
PFAM: Carboxymuconolactone decarboxylase; KEGG: pla:Plav_1659 carboxymuconolactone decarboxylase; IMG reference gene:2503006388; PFAM: Carboxymuconolactone decarboxylase family.
       0.593
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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