Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
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Dalk_0978Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: xca:xccb100_0599 anti-anti-sigma factor; IMG reference gene:2503006679; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor. (125 aa)    
Predicted Functional Partners:
Dalk_1048
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: pth:PTH_2273 anti-sigma regulatory factor; IMG reference gene:2503006749.
 
 0.968
Dalk_2921
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: pth:PTH_2273 anti-sigma regulatory factor; IMG reference gene:2503008647; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.968
Dalk_3498
KEGG: sfu:Sfum_4032 putative anti-sigma regulatory factor, serine/threonine protein kinase; IMG reference gene:2503009230; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.968
Dalk_5028
Protein serine/threonine phosphatase; PFAM: histidine kinase HAMP region domain protein; Cache domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sfu:Sfum_2204 serine phosphatase; IMG reference gene:2503010787; PFAM: Cache domain; HAMP domain; Stage II sporulation protein E (SpoIIE).
 
 0.948
Dalk_2462
Protein serine/threonine phosphatase; PFAM: histidine kinase HAMP region domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: ter:Tery_5014 serine phosphatase; IMG reference gene:2503008183; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE).
 
 0.946
Dalk_1527
Protein serine phosphatase with GAF(s) sensor(s); PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: ter:Tery_5014 serine phosphatase; IMG reference gene:2503007237; PFAM: GAF domain; Stage II sporulation protein E (SpoIIE).
 
 0.930
Dalk_1277
Protein serine/threonine phosphatase; PFAM: histidine kinase HAMP region domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mhu:Mhun_0060 serine phosphatase; IMG reference gene:2503006980; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE).
 
 0.925
Dalk_4073
Protein serine/threonine phosphatase; PFAM: histidine kinase HAMP region domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: dps:DP1889 hypothetical protein; IMG reference gene:2503009818; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE).
 
 0.923
Dalk_0873
KEGG: hch:HCH_00809 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; IMG reference gene:2503006574; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box.
  
 
 0.920
Dalk_1210
Protein serine/threonine phosphatase; PFAM: histidine kinase HAMP region domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: dde:Dde_0721 serine phosphatase; IMG reference gene:2503006913; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE).
 
 0.920
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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