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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_0978Anti-sigma-factor antagonist; TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: xca:xccb100_0599 anti-anti-sigma factor; IMG reference gene:2503006679; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor. (125 aa)    
Predicted Functional Partners:
Dalk_1048
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: pth:PTH_2273 anti-sigma regulatory factor; IMG reference gene:2503006749.
 
 0.974
Dalk_2921
Putative anti-sigma regulatory factor, serine/threonine protein kinase; KEGG: pth:PTH_2273 anti-sigma regulatory factor; IMG reference gene:2503008647; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.974
Dalk_3498
KEGG: sfu:Sfum_4032 putative anti-sigma regulatory factor, serine/threonine protein kinase; IMG reference gene:2503009230; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
 
 0.974
Dalk_0873
KEGG: hch:HCH_00809 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; IMG reference gene:2503006574; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box.
  
 
 0.954
Dalk_5028
Protein serine/threonine phosphatase; PFAM: histidine kinase HAMP region domain protein; Cache domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: sfu:Sfum_2204 serine phosphatase; IMG reference gene:2503010787; PFAM: Cache domain; HAMP domain; Stage II sporulation protein E (SpoIIE).
 
 0.950
Dalk_2462
Protein serine/threonine phosphatase; PFAM: histidine kinase HAMP region domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: ter:Tery_5014 serine phosphatase; IMG reference gene:2503008183; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE).
 
 0.948
Dalk_4452
KEGG: rxy:Rxyl_2663 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; IMG reference gene:2503010203; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box.
  
 
 0.939
Dalk_1527
Protein serine phosphatase with GAF(s) sensor(s); PFAM: GAF domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: ter:Tery_5014 serine phosphatase; IMG reference gene:2503007237; PFAM: GAF domain; Stage II sporulation protein E (SpoIIE).
 
 0.938
Dalk_3917
KEGG: ote:Oter_2216 PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; IMG reference gene:2503009661; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; Hpt domain; TIGRFAM: PAS domain S-box.
  
 
 0.933
Dalk_1277
Protein serine/threonine phosphatase; PFAM: histidine kinase HAMP region domain protein; Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: mhu:Mhun_0060 serine phosphatase; IMG reference gene:2503006980; PFAM: HAMP domain; Stage II sporulation protein E (SpoIIE).
 
 0.932
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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