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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_1433Tryptophan synthase, alpha subunit; Catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; IMG reference gene:2503007138; PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit. (265 aa)    
Predicted Functional Partners:
Dalk_1434
Tryptophan synthase, beta subunit; Catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; IMG reference gene:2503007139; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit.
 0.999
Dalk_1436
PFAM: Indole-3-glycerol phosphate synthase; KEGG: sfu:Sfum_1773 indole-3-glycerol-phosphate synthase; IMG reference gene:2503007141; PFAM: Indole-3-glycerol phosphate synthase.
 
 0.999
Dalk_1435
PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: dol:Dole_1565 phosphoribosylanthranilate isomerase; IMG reference gene:2503007140; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase.
 
 0.998
Dalk_3962
Pyridoxal-phosphate dependent TrpB-like enzyme; Catalyzes the formation of L-tryptophan from indole and L-serine; IMG reference gene:2503009707; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme.
  
 0.998
Dalk_1437
Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; IMG reference gene:2503007142; PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase.
  
 0.997
Dalk_1438
TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: sfu:Sfum_1775 glutamine amidotransferase of anthranilate synthase; IMG reference gene:2503007143; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase.
 
 0.994
Dalk_1439
KEGG: sfu:Sfum_1776 anthranilate synthase; TIGRFAM: anthranilate synthase component I; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; IMG reference gene:2503007144; PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme.
 
  
 0.987
Dalk_1228
TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: sfu:Sfum_3710 glutamine amidotransferase of anthranilate synthase; IMG reference gene:2503006931; PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase.
 
 0.980
Dalk_1229
Chorismate binding-like protein; PFAM: Anthranilate synthase component I domain protein; Chorismate binding-like; KEGG: sfu:Sfum_3709 para-aminobenzoate synthase, subunit I; IMG reference gene:2503006932; PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region.
 
  
 0.962
Dalk_0118
KEGG: dol:Dole_2359 N-(5'phosphoribosyl)anthranilate isomerase (PRAI); IMG reference gene:2503005813; PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase.
  
 
 0.942
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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