STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_1492PFAM: phospholipid/glycerol acyltransferase; KEGG: hau:Haur_1671 phospholipid/glycerol acyltransferase; IMG reference gene:2503007202; PFAM: Acyltransferase. (282 aa)    
Predicted Functional Partners:
Dalk_1448
PFAM: NAD-dependent epimerase/dehydratase; KEGG: hau:Haur_1672 NAD-dependent epimerase/dehydratase; IMG reference gene:2503007153; PFAM: NAD dependent epimerase/dehydratase family.
 
  
 0.784
Dalk_1814
PFAM: NAD-dependent epimerase/dehydratase; KEGG: hau:Haur_1672 NAD-dependent epimerase/dehydratase; IMG reference gene:2503007525; PFAM: NAD dependent epimerase/dehydratase family.
 
  
 0.784
Dalk_0959
Glycerol-3-phosphate O-acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: dol:Dole_1991 glycerol-3-phosphate O-acyltransferase; IMG reference gene:2503006660; PFAM: Acyltransferase; TIGRFAM: glycerol-3-phosphate O-acyltransferase.
  
 
 0.777
Dalk_0486
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: dol:Dole_0674 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); IMG reference gene:2503006186; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; TIGRFAM: glycerol-3-phosphate dehydrogenase (NAD(+)).
    
 0.772
Dalk_2014
PFAM: Sel1 domain protein repeat-containing protein; KEGG: nmu:Nmul_A0104 Sel1 repeat-containing protein; IMG reference gene:2503007731; PFAM: Sel1 repeat.
    
  0.769
Dalk_2213
PFAM: Sel1 domain protein repeat-containing protein; KEGG: aas:Aasi_0854 hypothetical protein; IMG reference gene:2503007933; PFAM: Sel1 repeat.
    
  0.769
Dalk_4007
PFAM: Sel1 domain protein repeat-containing protein; KEGG: aas:Aasi_0851 hypothetical protein; IMG reference gene:2503009752; PFAM: Sel1 repeat.
    
  0.769
Dalk_4227
FOG: TPR repeat SEL1 subfamily-like protein; KEGG: aas:Aasi_0854 hypothetical protein; IMG reference gene:2503009974; PFAM: Sel1 repeat.
    
  0.769
Dalk_5259
Hypothetical protein Dalk_5259; IMG reference gene:2503011019.
    
  0.769
Dalk_2573
PFAM: FAD dependent oxidoreductase; KEGG: pmy:Pmen_1559 FAD dependent oxidoreductase; IMG reference gene:2503008294; PFAM: FAD dependent oxidoreductase.
    
 0.766
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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