STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_1549PFAM: Sterol-binding domain protein; KEGG: dol:Dole_3107 sterol-binding domain-containing protein; IMG reference gene:2503007259; PFAM: SCP-2 sterol transfer family. (193 aa)    
Predicted Functional Partners:
Dalk_1548
PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: amr:AM1_5275 methanol dehydrogenase regulatory protein, putative; IMG reference gene:2503007258; PFAM: ATPase family associated with various cellular activities (AAA).
       0.580
Dalk_1545
Hypothetical protein Dalk_1545; IMG reference gene:2503007255.
       0.535
Dalk_1546
PFAM: transglutaminase domain protein; KEGG: amr:AM1_5278 transglutaminase-like superfamily protein, putative; IMG reference gene:2503007256; PFAM: Transglutaminase-like superfamily.
       0.535
Dalk_1547
PFAM: protein of unknown function DUF58; KEGG: amr:AM1_5277 hypothetical protein; IMG reference gene:2503007257; PFAM: Protein of unknown function DUF58.
       0.535
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.