STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_1669Acetyltransferase (isoleucine patch superfamily)-like protein; KEGG: mmx:MmarC6_0587 acetyltransferase; IMG reference gene:2503007379; PFAM: Bacterial transferase hexapeptide (three repeats). (199 aa)    
Predicted Functional Partners:
Dalk_1668
PFAM: glycosyl transferase family 2; KEGG: syn:slr2120 hypothetical protein; IMG reference gene:2503007378; PFAM: Cytidylyltransferase; Glycosyl transferase family 2.
     
 0.859
Dalk_1667
PFAM: dihydrodipicolinate synthetase; KEGG: cpo:COPRO5265_1180 dihydrodipicolinate synthase (DHDPS); IMG reference gene:2503007377; PFAM: Dihydrodipicolinate synthetase family.
 
     0.803
Dalk_1664
PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: mth:MTH970 D-3-phosphoglycerate dehydrogenase; IMG reference gene:2503007374; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
 
  
 0.793
Dalk_0627
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: dau:Daud_1770 DegT/DnrJ/EryC1/StrS aminotransferase; IMG reference gene:2503006328; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase.
  
 
 0.740
Dalk_0883
Glutamine--scyllo-inositol transaminase; PFAM: aminotransferase class V; DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: dol:Dole_3203 DegT/DnrJ/EryC1/StrS aminotransferase; IMG reference gene:2503006584; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family.
  
 
 0.740
Dalk_5095
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: sat:SYN_02671 pleiotrophic regulatory protein; IMG reference gene:2503010854; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family.
  
 
 0.740
Dalk_1665
KEGG: pmh:P9215_14611 hypothetical protein; IMG reference gene:2503007375; PFAM: Capsule polysaccharide biosynthesis protein.
       0.718
Dalk_1666
KEGG: nmu:Nmul_A0431 hypothetical protein; IMG reference gene:2503007376.
       0.718
Dalk_1660
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: rpb:RPB_1535 UDP-N-acetylglucosamine 2-epimerase; IMG reference gene:2503007370; PFAM: UDP-N-acetylglucosamine 2-epimerase; TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; UDP-N-acetylglucosamine 2-epimerase.
  
 
 0.716
Dalk_1671
PFAM: acylneuraminate cytidylyltransferase; KEGG: gur:Gura_4089 acylneuraminate cytidylyltransferase; IMG reference gene:2503007381; PFAM: Cytidylyltransferase.
     
 0.668
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.