STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_1830PFAM: transposase IS111A/IS1328/IS1533; KEGG: pvi:Cvib_1053 transposase IS116/IS110/IS902 family protein; IMG reference gene:2503007542; PFAM: Transposase. (261 aa)    
Predicted Functional Partners:
Dalk_4849
PFAM: transposase IS116/IS110/IS902 family protein; KEGG: spl:Spea_4213 transposase IS116/IS110/IS902 family protein; IMG reference gene:2503010607; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.481
Dalk_5202
PFAM: transposase IS116/IS110/IS902 family protein; KEGG: spl:Spea_4213 transposase IS116/IS110/IS902 family protein; IMG reference gene:2503010961; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.459
Dalk_5256
PFAM: transposase IS116/IS110/IS902 family protein; KEGG: spl:Spea_4213 transposase IS116/IS110/IS902 family protein; IMG reference gene:2503011016; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.459
Dalk_0284
PFAM: transposase IS116/IS110/IS902 family protein; KEGG: spl:Spea_4213 transposase IS116/IS110/IS902 family protein; IMG reference gene:2503005981; PFAM: Transposase IS116/IS110/IS902 family; Transposase.
  
     0.442
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.