Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_1968Phosphoglucomutase, alpha-D-glucose phosphate-specific; Catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; IMG reference gene:2503007685; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific. (550 aa)    
Predicted Functional Partners:
Dalk_1023
PFAM: phosphoglucose isomerase (PGI); KEGG: sfu:Sfum_3591 phosphoglucose isomerase (PGI); IMG reference gene:2503006724; PFAM: Phosphoglucose isomerase.
 
 0.994
Dalk_0887
Amylo-alpha-16-glucosidase; PFAM: alpha amylase catalytic region; Amylo-alpha-16-glucosidase; SMART: alpha amylase catalytic sub domain; KEGG: sat:SYN_00295 glycogen debranching enzyme/alpha-amylase; IMG reference gene:2503006588; PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme, archaeal type, putative.
  
 
 0.942
Dalk_3901
KEGG: mxa:MXAN_5831 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; IMG reference gene:2503009645; PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases.
  
 
 0.940
Dalk_4201
KEGG: sat:SYN_00231 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35; IMG reference gene:2503009948; PFAM: Carbohydrate phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylases.
  
 
 0.940
Dalk_2389
Phosphomannomutase; PFAM: phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: dol:Dole_1175 phosphomannomutase; IMG reference gene:2503008109; PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I.
  
 0.932
Dalk_0417
Transaldolase; KEGG: dol:Dole_2486 putative transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; IMG reference gene:2503006114; PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family.
  
 0.926
Dalk_3007
KEGG: rca:Rcas_1852 glucose-6-phosphate 1-dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; IMG reference gene:2503008734; PFAM: Glucose-6-phosphate dehydrogenase, NAD binding domain; Glucose-6-phosphate dehydrogenase, C-terminal domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase.
  
 0.911
Dalk_0889
KEGG: sat:SYN_02257 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; IMG reference gene:2503006590; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain.
 
 
 0.872
Dalk_2752
Transketolase family protein; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: dol:Dole_0367 transketolase; IMG reference gene:2503008475; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast.
  
 
 0.867
Dalk_1354
PFAM: triosephosphate isomerase; KEGG: dol:Dole_0499 triose-phosphate isomerase; IMG reference gene:2503007059; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase.
   
 
 0.865
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
Server load: low (18%) [HD]