Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Dalk_1978KEGG: maq:Maqu_2089 hypothetical protein; IMG reference gene:2503007695. (354 aa)    
Predicted Functional Partners:
Dalk_1977
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: aha:AHA_0367 DNA-binding transcriptional repressor FabR; IMG reference gene:2503007694; PFAM: Bacterial regulatory proteins, tetR family.
       0.603
Dalk_1979
KEGG: aby:ABAYE0959 hypothetical protein; IMG reference gene:2503007696.
       0.526
Dalk_1976
KEGG: hch:HCH_00320 hypothetical protein; IMG reference gene:2503007693.
       0.471
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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