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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_1981PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pzu:PHZ_c1079 2-deoxy-D-gluconate 3-dehydrogenase; IMG reference gene:2503007698; PFAM: short chain dehydrogenase. (256 aa)    
Predicted Functional Partners:
Dalk_1055
PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; Beta-ketoacyl synthase; KEGG: sen:SACE_0023 beta-ketoacyl synthase; IMG reference gene:2503006756; PFAM: Acyl transferase domain; FabA-like domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: PfaB family protein.
  
 0.912
Dalk_4195
Protein tyrosine/serine phosphatase; PFAM: putative tyrosine phosphatase; KEGG: pca:Pcar_2841 hypothetical protein; IMG reference gene:2503009942; PFAM: Tyrosine phosphatase family.
    
  0.906
Dalk_0190
PFAM: sulfatase; type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: sus:Acid_6183 sulfatase; IMG reference gene:2503005885; PFAM: TAT (twin-arginine translocation) pathway signal sequence; Sulfatase.
   
 0.890
Dalk_0773
TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: cpc:Cpar_1092 nuclease SbcCD, D subunit; IMG reference gene:2503006474; PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; TIGRFAM: exonuclease SbcD.
    
 0.890
Dalk_2989
PFAM: sulfatase; KEGG: rba:RB4880 mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase); IMG reference gene:2503008716; PFAM: Sulfatase.
   
 0.890
Dalk_3816
PFAM: metallophosphoesterase; KEGG: mbu:Mbur_1260 metallophosphoesterase; IMG reference gene:2503009560; PFAM: Calcineurin-like phosphoesterase.
    
 0.890
Dalk_4973
PFAM: metallophosphoesterase; IMG reference gene:2503010732.
    
 0.890
Dalk_1056
TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: ava:Ava_2590 beta-ketoacyl synthase; IMG reference gene:2503006757; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA.
  
 0.873
Dalk_2931
TIGRFAM: sulfate transporter; PFAM: response regulator receiver; Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: dde:Dde_3641 sulfate permease; IMG reference gene:2503008657; PFAM: Response regulator receiver domain; Sulfate transporter family; STAS domain.
   
 0.871
Dalk_1218
KEGG: oan:Oant_2946 hypothetical protein; IMG reference gene:2503006921.
    
 0.870
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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