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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_1985PFAM: beta-lactamase domain protein; KEGG: gur:Gura_2928 beta-lactamase domain-containing protein; IMG reference gene:2503007702; PFAM: Metallo-beta-lactamase superfamily. (221 aa)    
Predicted Functional Partners:
Dalk_1983
PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: dde:Dde_2459 ThiF protein, putative; IMG reference gene:2503007700; PFAM: MoeZ/MoeB domain; ThiF family.
 
  
  0.743
Dalk_1984
PFAM: thiamineS protein; KEGG: dvl:Dvul_1876 thiamineS protein; IMG reference gene:2503007701; PFAM: ThiS family.
    
  0.698
Dalk_0198
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; SMART: Rhodanese domain protein; KEGG: sfu:Sfum_1398 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; IMG reference gene:2503005893; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain.
  
 0.697
Dalk_4233
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dps:DP0550 NADH oxidase; IMG reference gene:2503009980; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.
  
 0.697
Dalk_4729
Putative thiosulfate sulfur transferase; SMART: Rhodanese domain protein; KEGG: cts:Ctha_0892 rhodanese domain protein; IMG reference gene:2503010485; PFAM: Rhodanese-like domain.
  
 0.643
Dalk_1891
PFAM: ribosomal protein S11; KEGG: gme:Gmet_0651 30S ribosomal protein S11; IMG reference gene:2503007603; PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11.
    
  0.624
Dalk_1923
PFAM: ribosomal protein L10; KEGG: sfu:Sfum_1547 ribosomal protein L10; IMG reference gene:2503007635; PFAM: Ribosomal protein L10.
   
 
  0.619
Dalk_2346
PFAM: beta-lactamase domain protein; Rhodanese domain protein; KEGG: sus:Acid_7272 beta-lactamase domain-containing protein; IMG reference gene:2503008066; PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain.
 
0.580
Dalk_1083
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dol:Dole_2294 pyridine nucleotide-disulphide oxidoreductase dimerisation region; IMG reference gene:2503006784; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.
    
 0.552
Dalk_3493
KEGG: dol:Dole_0466 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase; IMG reference gene:2503009225; PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I.
   
 
 0.551
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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