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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_1986Hypothetical protein Dalk_1986; IMG reference gene:2503007703. (168 aa)    
Predicted Functional Partners:
Dalk_1987
AMP-dependent CoA ligase/synthetase; PFAM: AMP-dependent synthetase and ligase; KEGG: bxe:Bxe_C0286 putative AMP-dependent synthetase and ligase; IMG reference gene:2503007704; PFAM: AMP-binding enzyme.
       0.482
Dalk_1988
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpt:Rpal_4568 ABC transporter related; IMG reference gene:2503007705; PFAM: ABC transporter.
       0.443
Dalk_1989
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bov:BOV_A0024 branched-chain amino acid ABC transporter, ATP-binding protein; IMG reference gene:2503007706; PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
       0.443
Dalk_1990
PFAM: inner-membrane translocator; KEGG: stp:Strop_1805 inner-membrane translocator; IMG reference gene:2503007707; PFAM: Branched-chain amino acid transport system / permease component.
       0.443
Dalk_1991
PFAM: inner-membrane translocator; KEGG: bph:Bphy_1607 inner-membrane translocator; IMG reference gene:2503007708; PFAM: Branched-chain amino acid transport system / permease component.
       0.443
Dalk_1985
PFAM: beta-lactamase domain protein; KEGG: gur:Gura_2928 beta-lactamase domain-containing protein; IMG reference gene:2503007702; PFAM: Metallo-beta-lactamase superfamily.
       0.431
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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