STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_1992KEGG: bph:Bphy_2015 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; IMG reference gene:2503007709; PFAM: Receptor family ligand binding region. (445 aa)    
Predicted Functional Partners:
Dalk_1991
PFAM: inner-membrane translocator; KEGG: bph:Bphy_1607 inner-membrane translocator; IMG reference gene:2503007708; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.989
Dalk_1990
PFAM: inner-membrane translocator; KEGG: stp:Strop_1805 inner-membrane translocator; IMG reference gene:2503007707; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.988
Dalk_3276
PFAM: inner-membrane translocator; KEGG: rpc:RPC_4169 inner-membrane translocator; IMG reference gene:2503009006; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.906
Dalk_4902
PFAM: inner-membrane translocator; KEGG: cau:Caur_3638 inner-membrane translocator; IMG reference gene:2503010660; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.901
Dalk_2917
PFAM: inner-membrane translocator; KEGG: mpo:Mpop_3556 inner-membrane translocator; IMG reference gene:2503008643; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.897
Dalk_3277
PFAM: inner-membrane translocator; KEGG: reu:Reut_A1400 inner-membrane translocator; IMG reference gene:2503009007; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.897
Dalk_4761
PFAM: inner-membrane translocator; KEGG: rpt:Rpal_4886 inner-membrane translocator; IMG reference gene:2503010518; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.894
Dalk_4901
PFAM: inner-membrane translocator; KEGG: rfr:Rfer_2390 inner-membrane translocator; IMG reference gene:2503010659; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.894
Dalk_4762
PFAM: inner-membrane translocator; KEGG: cti:RALTA_A1799 putative ABC transporteur, membrane component; IMG reference gene:2503010519; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.888
Dalk_2918
PFAM: inner-membrane translocator; KEGG: bpt:Bpet1185 putative branched-chain amino acid transport permease; IMG reference gene:2503008644; PFAM: Branched-chain amino acid transport system / permease component.
 
 
 0.887
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.