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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2007KEGG: bra:BRADO2238 hypothetical protein; IMG reference gene:2503007724. (364 aa)    
Predicted Functional Partners:
Dalk_0372
TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: transferase hexapeptide repeat containing protein; Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: cch:Cag_0614 parallel beta-helix repeat; IMG reference gene:2503006069.
 
 0.794
Dalk_4253
KEGG: bra:BRADO2238 hypothetical protein; IMG reference gene:2503010001; PFAM: GDSL-like Lipase/Acylhydrolase.
  
     0.771
Dalk_0716
KEGG: pmh:P9215_04281 hypothetical protein; IMG reference gene:2503006417.
 
     0.769
Dalk_0237
Hypothetical protein Dalk_0237; KEGG: ace:Acel_0417 N-acetylmuramoyl-L-alanine amidase, family 2; IMG reference gene:2503005933.
  
 0.768
Dalk_0762
KEGG: dol:Dole_1994 hypothetical protein; IMG reference gene:2503006463.
  
 0.768
Dalk_0764
KEGG: dol:Dole_1994 hypothetical protein; IMG reference gene:2503006465.
  
 0.768
Dalk_2157
KEGG: aby:ABAYE0792 hypothetical protein; IMG reference gene:2503007877.
  
 0.768
Dalk_2295
PFAM: Haemagluttinin repeat-containing protein; KEGG: predicted protein; IMG reference gene:2503008015.
  
 0.768
Dalk_2296
TIGRFAM: filamentous haemagglutinin family outer membrane protein; PFAM: Haemagluttinin repeat-containing protein; filamentous haemagglutinin domain protein; KEGG: cch:Cag_0616 parallel beta-helix repeat; IMG reference gene:2503008016.
  
 0.768
Dalk_4455
PFAM: Carbamoyltransferase; KEGG: syr:SynRCC307_0149 carbamoyltransferase; IMG reference gene:2503010206; PFAM: Carbamoyltransferase.
 
     0.764
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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