STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2064PFAM: regulatory protein TetR; KEGG: dol:Dole_2175 TetR family transcriptional regulator; IMG reference gene:2503007781; PFAM: Bacterial regulatory proteins, tetR family. (222 aa)    
Predicted Functional Partners:
Dalk_2063
KEGG: mjl:Mjls_3218 wyosine base formation; IMG reference gene:2503007780; PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; TIGRFAM: TIGR03084 family protein; uncharacterized Actinobacterial protein TIGR03083.
       0.773
Dalk_1158
Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: ppr:PBPRB1369 hypothetical protein; IMG reference gene:2503006860; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.754
Dalk_4166
PFAM: regulatory protein TetR; KEGG: dol:Dole_2974 TetR family transcriptional regulator; IMG reference gene:2503009912; PFAM: NAD dependent epimerase/dehydratase family; Bacterial regulatory proteins, tetR family.
  
     0.718
Dalk_1849
PFAM: regulatory protein TetR; KEGG: sen:SACE_3864 TetR family transcriptional regulator; IMG reference gene:2503007561; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.694
Dalk_2460
PFAM: regulatory protein TetR; KEGG: sfu:Sfum_1988 transcriptional regulator, TetR family; IMG reference gene:2503008181; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.681
Dalk_1395
PFAM: regulatory protein TetR; KEGG: dth:DICTH_0060 transcriptional regulator, AcrR family; IMG reference gene:2503007100; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.673
Dalk_4892
PFAM: regulatory protein TetR; KEGG: ava:Ava_3641 TetR family transcriptional regulator; IMG reference gene:2503010650; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.670
Dalk_3358
PFAM: regulatory protein TetR; KEGG: bbr:BB3154 TetR family transcriptional regulator; IMG reference gene:2503009088; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.650
Dalk_3874
Transcriptional regulator, TetR family; PFAM: regulatory protein MerR; regulatory protein TetR; KEGG: dol:Dole_0557 TetR family transcriptional regulator; IMG reference gene:2503009618; PFAM: MerR family regulatory protein; Bacterial regulatory proteins, tetR family.
  
     0.623
Dalk_2493
PFAM: regulatory protein TetR; KEGG: dol:Dole_0457 TetR family transcriptional regulator; IMG reference gene:2503008214; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.554
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.