STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2129SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_2349 TPR repeat-containing protein; IMG reference gene:2503007849. (609 aa)    
Predicted Functional Partners:
Dalk_5269
PFAM: TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dol:Dole_2418 TPR repeat-containing protein; IMG reference gene:2503011029; PFAM: Tetratricopeptide repeat.
 
  
  0.860
Dalk_2207
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: hypothetical protein; IMG reference gene:2503007927; PFAM: Tetratricopeptide repeat.
 
  
 0.854
Dalk_4255
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: sus:Acid_4736 TPR repeat-containing protein; IMG reference gene:2503010003; PFAM: Tetratricopeptide repeat.
 
  
  0.836
Dalk_1883
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: rba:RB12434 O-GlcNAc transferase; IMG reference gene:2503007595; PFAM: Tetratricopeptide repeat.
 
  
  0.833
Dalk_2217
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dol:Dole_2418 TPR repeat-containing protein; IMG reference gene:2503007937; PFAM: Tetratricopeptide repeat.
 
  
  0.827
Dalk_3141
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pmt:PMT0296 TPR repeat-containing protein; IMG reference gene:2503008870; PFAM: Tetratricopeptide repeat.
 
  
  0.827
Dalk_1507
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_3; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_3996 tetratricopeptide TPR_2; IMG reference gene:2503007217; PFAM: Tetratricopeptide repeat.
 
  
  0.822
Dalk_3428
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: mar:MAE_03610 TPR repeat-containing protein; IMG reference gene:2503009160; PFAM: Tetratricopeptide repeat.
 
  
  0.820
Dalk_3993
PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_3497 peptidase-like; IMG reference gene:2503009738; PFAM: Protein of unknown function (DUF3592).
 
  
  0.820
Dalk_2169
PFAM: TPR repeat-containing protein; Sel1 domain protein repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dol:Dole_2418 TPR repeat-containing protein; IMG reference gene:2503007889; PFAM: Tetratricopeptide repeat.
 
  
  0.817
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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