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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2136PFAM: protein of unknown function UPF0118; KEGG: dol:Dole_2006 hypothetical protein; IMG reference gene:2503007856; PFAM: Domain of unknown function DUF20. (365 aa)    
Predicted Functional Partners:
Dalk_2135
KEGG: dol:Dole_1530 hypothetical protein; IMG reference gene:2503007855.
       0.768
Dalk_2858
TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: dol:Dole_0630 ATP synthase F0, A subunit; IMG reference gene:2503008583; PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes).
    
  0.753
Dalk_4309
TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: dol:Dole_0801 ATP synthase F0, A subunit; IMG reference gene:2503010057; PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes).
    
  0.753
Dalk_2057
KEGG: dol:Dole_1427 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; phosphoribosylamine/glycine ligase; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylglycinamide synthetase; IMG reference gene:2503007774; PFAM: Phosphoribosylglycinamide synthetase, N domain; AIR carboxylase; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; phosphoribosylaminoimidazole carboxylase, PurE protein.
    
  0.543
Dalk_2137
Hypothetical protein Dalk_2137; IMG reference gene:2503007857.
       0.536
Dalk_1188
TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: gur:Gura_2064 adenylosuccinate lyase; IMG reference gene:2503006890; PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase.
    
  0.479
Dalk_0912
KEGG: dol:Dole_2369 phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; IMG reference gene:2503006613; PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase.
      0.450
Dalk_4331
PFAM: protein of unknown function DUF1058; SH3 type 3 domain protein; SMART: SH3 domain protein; KEGG: sde:Sde_1715 SH3 domain protein-like; IMG reference gene:2503010079; PFAM: Bacterial SH3 domain.
  
   
 0.447
Dalk_1539
PFAM: GCN5-related N-acetyltransferase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: aeh:Mlg_0532 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; IMG reference gene:2503007249; PFAM: Acetyltransferase (GNAT) family; Carbon-nitrogen hydrolase.
 
   
 0.440
Dalk_3368
PFAM: glutamate-ammonia ligase adenylyltransferase; GlnD PII-uridylyltransferase; KEGG: aeh:Mlg_2698 (glutamate--ammonia-ligase) adenylyltransferase; IMG reference gene:2503009098; PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase.
  
     0.412
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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