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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2153Hypothetical protein Dalk_2153; IMG reference gene:2503007873. (188 aa)    
Predicted Functional Partners:
Dalk_1092
KEGG: swd:Swoo_2503 hypothetical protein; IMG reference gene:2503006793.
  
 0.827
Dalk_2500
PFAM: peptidase C11 clostripain; SMART: Fibronectin type III domain protein; KEGG: rca:Rcas_2277 peptidase C11 clostripain; IMG reference gene:2503008221; PFAM: Clostripain family.
  
 0.827
Dalk_2501
PFAM: peptidase C11 clostripain; SMART: Fibronectin type III domain protein; KEGG: rca:Rcas_2277 peptidase C11 clostripain; IMG reference gene:2503008222; PFAM: Clostripain family.
  
 0.827
Dalk_2502
PFAM: peptidase C11 clostripain; KEGG: rca:Rcas_2277 peptidase C11 clostripain; IMG reference gene:2503008223; PFAM: Clostripain family.
  
 0.827
Dalk_2289
PFAM: PKD domain containing protein; NHL repeat containing protein; SMART: LamG domain protein jellyroll fold domain protein; KEGG: mac:MA4315 cell surface protein; IMG reference gene:2503008009; PFAM: NHL repeat; PKD domain.
   
 0.805
Dalk_2491
PFAM: OmpA/MotB domain protein; SMART: von Willebrand factor type A; KEGG: sat:SYN_00198 outer membrane porin protein; IMG reference gene:2503008212; PFAM: von Willebrand factor type A domain; OmpA family.
   
 0.772
Dalk_0230
PFAM: OmpA/MotB domain protein; KEGG: sat:SYN_00198 outer membrane porin protein; IMG reference gene:2503005926; PFAM: von Willebrand factor type A domain; OmpA family.
   
 0.759
Dalk_0310
OmpA/MotB domain protein; PFAM: von Willebrand factor type A; OmpA/MotB domain protein; KEGG: sat:SYN_00198 outer membrane porin protein; IMG reference gene:2503006007; PFAM: von Willebrand factor type A domain; OmpA family.
   
 0.759
Dalk_1041
PFAM: OmpA/MotB domain protein; KEGG: dol:Dole_1995 OmpA/MotB domain-containing protein; IMG reference gene:2503006742; PFAM: OmpA family.
   
 0.759
Dalk_3147
PFAM: OmpA/MotB domain protein; KEGG: dol:Dole_2209 peptidoglycan-associated lipoprotein; IMG reference gene:2503008876; PFAM: OmpA family; TIGRFAM: peptidoglycan-associated lipoprotein.
   
 0.759
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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