STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2498PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: afu:AF2100 acetolactate synthase, large subunit (IlvB-4); IMG reference gene:2503008219; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain. (618 aa)    
Predicted Functional Partners:
Dalk_0561
TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; acetolactate synthase small subunit; KEGG: dol:Dole_2038 acetolactate synthase, small subunit; IMG reference gene:2503006262; PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit.
 0.993
Dalk_0559
KEGG: dol:Dole_2036 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; IMG reference gene:2503006260; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase.
 
 0.910
Dalk_1825
PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: cps:CPS_2080 dehydratase family protein; IMG reference gene:2503007537; PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase.
 
 0.908
Dalk_0563
KEGG: dol:Dole_2039 ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: acetohydroxy acid isomeroreductase; Acetohydroxy acid isomeroreductase catalytic domain protein; IMG reference gene:2503006264; PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase.
 
 
 0.884
Dalk_4144
Pyruvate-ferredoxin oxidoreductase, alpha subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: dvl:Dvul_0348 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; IMG reference gene:2503009890; PFAM: Domain of unknown function; domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin [...]
  
 
 0.882
Dalk_1323
Phosphoenolpyruvate phosphomutase; TIGRFAM: cytidyltransferase-related domain protein; phosphoenolpyruvate phosphomutase; PFAM: cytidylyltransferase; KEGG: azo:azo2698 putative phosphoenolpyruvate phosphomutase; IMG reference gene:2503007027; PFAM: Cytidylyltransferase; TIGRFAM: phosphoenolpyruvate phosphomutase; cytidyltransferase-related domain.
  
 
 0.849
Dalk_2499
PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: afu:AF2100 acetolactate synthase, large subunit (IlvB-4); IMG reference gene:2503008220; PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
 
    
0.838
Dalk_0180
TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: drm:Dred_0287 3-isopropylmalate dehydratase, small subunit; IMG reference gene:2503005875; PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit.
 
 
 0.775
Dalk_0181
3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; IMG reference gene:2503005876; PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein.
 
 
 0.717
Dalk_4199
PFAM: alpha-acetolactate decarboxylase; KEGG: dol:Dole_2293 acetolactate decarboxylase; IMG reference gene:2503009946; PFAM: Alpha-acetolactate decarboxylase; TIGRFAM: alpha-acetolactate decarboxylase.
  
 
 0.706
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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