STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2573PFAM: FAD dependent oxidoreductase; KEGG: pmy:Pmen_1559 FAD dependent oxidoreductase; IMG reference gene:2503008294; PFAM: FAD dependent oxidoreductase. (525 aa)    
Predicted Functional Partners:
Dalk_2599
TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: ank:AnaeK_3540 glycerol kinase; IMG reference gene:2503008320; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase.
 0.998
Dalk_0486
Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: dol:Dole_0674 glycerol-3-phosphate dehydrogenase (NAD(P)(+)); IMG reference gene:2503006186; PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; TIGRFAM: glycerol-3-phosphate dehydrogenase (NAD(+)).
   
 0.883
Dalk_4840
Putative heterodisulfide reductase, hybrid of subunits C and E; KEGG: gur:Gura_1600 hypothetical protein; IMG reference gene:2503010598; PFAM: Nitrate reductase gamma subunit.
  
 
 0.822
Dalk_5066
Putative heterodisulfide reductase, hybrid of subunits C and E; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mba:Mbar_A1599 CoB-CoM heterodisulfide reductase, subunit D; IMG reference gene:2503010825; PFAM: Nitrate reductase gamma subunit.
  
 
 0.822
Dalk_0959
Glycerol-3-phosphate O-acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: dol:Dole_1991 glycerol-3-phosphate O-acyltransferase; IMG reference gene:2503006660; PFAM: Acyltransferase; TIGRFAM: glycerol-3-phosphate O-acyltransferase.
    
 0.797
Dalk_3176
PFAM: carbohydrate kinase FGGY; KEGG: pap:PSPA7_2134 putative carbohydrate kinase; IMG reference gene:2503008905; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain.
  
 0.795
Dalk_0730
PFAM: FAD dependent oxidoreductase; KEGG: sth:STH2651 putative oxidoreductase; IMG reference gene:2503006431; PFAM: FAD dependent oxidoreductase.
    
 0.787
Dalk_0887
Amylo-alpha-16-glucosidase; PFAM: alpha amylase catalytic region; Amylo-alpha-16-glucosidase; SMART: alpha amylase catalytic sub domain; KEGG: sat:SYN_00295 glycogen debranching enzyme/alpha-amylase; IMG reference gene:2503006588; PFAM: Amylo-alpha-1,6-glucosidase; Glycogen debranching enzyme N terminal; Alpha amylase, catalytic domain; TIGRFAM: glycogen debranching enzyme, archaeal type, putative.
   
 
 0.778
Dalk_3659
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: dol:Dole_0155 3-hydroxyacyl-CoA dehydrogenase NAD-binding; IMG reference gene:2503009403; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
     
 0.776
Dalk_1076
PFAM: phospholipid/glycerol acyltransferase; KEGG: dol:Dole_2499 1-acylglycerol-3-phosphate O-acyltransferase; IMG reference gene:2503006777; PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases.
    
 0.766
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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