STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2575PFAM: ketose-bisphosphate aldolase class-II; KEGG: tte:TTE0137 putative aldolase; IMG reference gene:2503008296; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases. (282 aa)    
Predicted Functional Partners:
Dalk_1355
KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; IMG reference gene:2503007060; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I.
  
 0.987
Dalk_1354
PFAM: triosephosphate isomerase; KEGG: dol:Dole_0499 triose-phosphate isomerase; IMG reference gene:2503007059; PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase.
  
 0.971
Dalk_2764
Enolase (Phosphopyruvate hydratase); PFAM: enolase; KEGG: dol:Dole_0339 phosphopyruvate hydratase; IMG reference gene:2503008487; PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase.
  
 0.953
Dalk_0244
PFAM: phosphoglycerate kinase; KEGG: hypothetical protein; IMG reference gene:2503005940; PFAM: Phosphoglycerate kinase.
  
 0.946
Dalk_0617
PFAM: phosphoglycerate kinase; KEGG: gsu:GSU1628 phosphoglycerate kinase/triosephosphate isomerase; IMG reference gene:2503006318; PFAM: Phosphoglycerate kinase.
  
 0.946
Dalk_1023
PFAM: phosphoglucose isomerase (PGI); KEGG: sfu:Sfum_3591 phosphoglucose isomerase (PGI); IMG reference gene:2503006724; PFAM: Phosphoglucose isomerase.
  
 0.946
Dalk_2574
PFAM: class II aldolase/adducin family protein; KEGG: bwe:BcerKBAB4_0328 class II aldolase/adducin family protein; IMG reference gene:2503008295; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase.
    
 0.904
Dalk_3774
KEGG: pth:PTH_2214 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; IMG reference gene:2503009518; PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase.
  
 0.902
Dalk_2752
Transketolase family protein; TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: dol:Dole_0367 transketolase; IMG reference gene:2503008475; PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: transketolase, bacterial and yeast.
  
 0.899
Dalk_0417
Transaldolase; KEGG: dol:Dole_2486 putative transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase; IMG reference gene:2503006114; PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family.
  
 0.897
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.