STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2576PFAM: aminoglycoside phosphotransferase; KEGG: lbf:LBF_0723 phosphotransferase; IMG reference gene:2503008297; PFAM: Phosphotransferase enzyme family. (276 aa)    
Predicted Functional Partners:
Dalk_2577
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mta:Moth_0475 alcohol dehydrogenase; IMG reference gene:2503008298; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
  
    0.733
Dalk_2575
PFAM: ketose-bisphosphate aldolase class-II; KEGG: tte:TTE0137 putative aldolase; IMG reference gene:2503008296; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases.
       0.675
Dalk_0200
PFAM: GTPase EngC; KEGG: ana:alr8077 hypothetical protein; IMG reference gene:2503005895; PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A.
 
  
  0.594
Dalk_2578
PFAM: regulatory protein GntR HTH; KEGG: bbt:BBta_5996 GntR family transcriptional regulator; IMG reference gene:2503008299; PFAM: Bacterial regulatory proteins, gntR family; UTRA domain.
 
     0.579
Dalk_3659
PFAM: Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: dol:Dole_0155 3-hydroxyacyl-CoA dehydrogenase NAD-binding; IMG reference gene:2503009403; PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain.
 
 0.574
Dalk_2574
PFAM: class II aldolase/adducin family protein; KEGG: bwe:BcerKBAB4_0328 class II aldolase/adducin family protein; IMG reference gene:2503008295; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase.
       0.568
Dalk_4154
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bra:BRADO4966 putative NADPH quinone oxidoreductase; IMG reference gene:2503009900; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
  
 0.556
Dalk_2573
PFAM: FAD dependent oxidoreductase; KEGG: pmy:Pmen_1559 FAD dependent oxidoreductase; IMG reference gene:2503008294; PFAM: FAD dependent oxidoreductase.
       0.512
Dalk_3757
Translation initiation factor, aIF-2BI family; KEGG: dol:Dole_1306 eIF-2B alpha/beta/delta-related protein; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related; IMG reference gene:2503009501; PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase.
  
 
  0.504
Dalk_0637
PFAM: GCN5-related N-acetyltransferase; KEGG: swo:Swol_0200 acetyltransferase; IMG reference gene:2503006338; PFAM: Acetyltransferase (GNAT) family.
  
 
   0.466
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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