STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2637KEGG: dde:Dde_0645 hypothetical protein; IMG reference gene:2503008359; PFAM: Thioredoxin. (128 aa)    
Predicted Functional Partners:
Dalk_4702
TIGRFAM: peptide methionine sulfoxide reductase; methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; Methionine sulfoxide reductase B; KEGG: pca:Pcar_2611 peptide methionine sulfoxide reductase; IMG reference gene:2503010458; PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase.
   
 0.997
Dalk_1203
KEGG: dol:Dole_2161 peroxiredoxin-like protein; IMG reference gene:2503006906; PFAM: AhpC/TSA family.
  
 0.972
Dalk_1204
KEGG: dol:Dole_2162 alkyl hydroperoxide reductase; IMG reference gene:2503006907; PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family.
  
 0.972
Dalk_0298
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE2131 NADH:flavin oxidoreductase; IMG reference gene:2503005995; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family.
  
 0.938
Dalk_2520
PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: gur:Gura_1595 NADH:flavin oxidoreductase/NADH oxidase; IMG reference gene:2503008241; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH:flavin oxidoreductase / NADH oxidase family.
  
 0.938
Dalk_0926
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the rate-limiting step in dNTP synthesis; IMG reference gene:2503006627; PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent.
  
 
 0.933
Dalk_4701
PFAM: Thioredoxin domain; KEGG: dol:Dole_0131 thioredoxin domain-containing protein; IMG reference gene:2503010457; PFAM: Thioredoxin.
  
 
 0.925
Dalk_4730
PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: dde:Dde_2782 hypothetical protein; IMG reference gene:2503010486; PFAM: Cytochrome C biogenesis protein transmembrane region.
  
 
 0.925
Dalk_0299
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dth:DICTH_1917 NADH oxidase; IMG reference gene:2503005996; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.
  
 0.917
Dalk_3001
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dde:Dde_1463 mercuric reductase, putative; IMG reference gene:2503008728; PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain.
  
 0.917
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.