STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2643PFAM: acyl-ACP thioesterase; KEGG: dol:Dole_2590 acyl-ACP thioesterase; IMG reference gene:2503008365; PFAM: Acyl-ACP thioesterase. (245 aa)    
Predicted Functional Partners:
Dalk_2642
PFAM: Patatin; KEGG: vha:VIBHAR_06415 phospholipase; IMG reference gene:2503008364; PFAM: Patatin-like phospholipase.
       0.783
Dalk_1056
TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: ava:Ava_2590 beta-ketoacyl synthase; IMG reference gene:2503006757; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: polyketide-type polyunsaturated fatty acid synthase PfaA.
     
 0.739
Dalk_3309
3-Oxoacyl-(acyl carrier protein) synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: tye:THEYE_A0103 beta-ketoacyl-acyl carrier protein synthase II; IMG reference gene:2503009039; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II.
     
 0.573
Dalk_2641
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: dol:Dole_2366 acyl-CoA dehydrogenase domain-containing protein; IMG reference gene:2503008363; PFAM: Acyl-CoA dehydrogenase N terminal; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain.
       0.548
Dalk_1055
PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; Beta-ketoacyl synthase; KEGG: sen:SACE_0023 beta-ketoacyl synthase; IMG reference gene:2503006756; PFAM: Acyl transferase domain; FabA-like domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: PfaB family protein.
     
 0.532
Dalk_4154
PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: bra:BRADO4966 putative NADPH quinone oxidoreductase; IMG reference gene:2503009900; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
 
  
  0.528
Dalk_1750
3-Oxoacyl-(acyl carrier protein) synthase II; PFAM: Beta-ketoacyl synthase; KEGG: sat:SYN_01694 3-oxoacyl-[acyl-carrier-protein] synthase; IMG reference gene:2503007461; PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
     
 0.503
Dalk_0561
TIGRFAM: acetolactate synthase, small subunit; PFAM: amino acid-binding ACT domain protein; acetolactate synthase small subunit; KEGG: dol:Dole_2038 acetolactate synthase, small subunit; IMG reference gene:2503006262; PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit.
  
    0.493
Dalk_2333
PFAM: regulatory protein TetR; KEGG: pla:Plav_0885 TetR family transcriptional regulator; IMG reference gene:2503008053; PFAM: Bacterial regulatory proteins, tetR family.
  
  
  0.419
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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