STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2864Putative PTS IIA-like nitrogen-regulatory protein; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: gur:Gura_0893 putative PTS IIA-like nitrogen-regulatory protein PtsN; IMG reference gene:2503008589; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2. (227 aa)    
Predicted Functional Partners:
Dalk_0206
PTSINtr with GAF domain, PtsP; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; GAF domain protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: cja:CJA_0466 phosphoenolpyruvate-protein phosphotransferase PtsP; IMG reference gene:2503005902; PFAM: GAF domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase.
 
  
 0.880
Dalk_1943
TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: dol:Dole_2698 phosphoenolpyruvate-protein phosphotransferase; IMG reference gene:2503007660; PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase.
 
 
 0.878
Dalk_1357
Phosphotransferase system (PTS), Gluconate specific EIIA; PFAM: PTS system fructose subfamily IIA component; KEGG: dol:Dole_0502 PTS system fructose subfamily IIA component; IMG reference gene:2503007062; PFAM: PTS system fructose IIA component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA component.
 
 
 0.839
Dalk_2865
Chloride channel core; PFAM: CBS domain containing protein; Chloride channel core; KEGG: bth:BT_3944 putative chloride channel protein; IMG reference gene:2503008590; PFAM: CBS domain; Voltage gated chloride channel.
       0.809
Dalk_1358
PFAM: conserved hypothetical protein; KEGG: dol:Dole_0503 hypothetical protein; IMG reference gene:2503007063; PFAM: P-loop ATPase protein family.
  
  
 0.735
Dalk_1942
Phosphotransferase system, phosphocarrier protein PtsH (HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: dol:Dole_2699 phosphotransferase system, phosphocarrier protein HPr; IMG reference gene:2503007659; PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family.
 
 
 0.724
Dalk_1360
TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: sfu:Sfum_2068 sigma 54 modulation protein/ribosomal protein S30EA; IMG reference gene:2503007065; PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein.
  
  
 0.648
Dalk_0135
Putative PTS IIA-like nitrogen-regulatory protein; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: gka:GK1838 PTS system, fructose-specific enzyme II, BC component; IMG reference gene:2503005830; PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2.
  
  
 
0.638
Dalk_2575
PFAM: ketose-bisphosphate aldolase class-II; KEGG: tte:TTE0137 putative aldolase; IMG reference gene:2503008296; PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases.
 
 
 0.613
Dalk_2866
Hypothetical protein Dalk_2866; KEGG: mmr:Mmar10_0850 UspA domain-containing protein; IMG reference gene:2503008591.
       0.611
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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