STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2876TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: dol:Dole_2674 histidinol-phosphate phosphatase family protein; IMG reference gene:2503008601; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family domain. (197 aa)    
Predicted Functional Partners:
Dalk_4349
KEGG: dde:Dde_2619 phosphoheptose isomerase; IMG reference gene:2503010097.
 
 0.997
Dalk_1939
rfaE bifunctional protein; TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; KEGG: sfu:Sfum_1685 cytidyltransferase-related domain; IMG reference gene:2503007656; PFAM: Cytidylyltransferase; TIGRFAM: rfaE bifunctional protein, domain II; cytidyltransferase-related domain.
  
 0.996
Dalk_1695
KEGG: sus:Acid_2237 sugar isomerase (SIS); IMG reference gene:2503007405; PFAM: SIS domain.
 
 
 0.981
Dalk_1697
PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: cau:Caur_3750 GHMP kinase; IMG reference gene:2503007407; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain.
 
 0.974
Dalk_2824
rfaE bifunctional protein; TIGRFAM: cytidyltransferase-related domain protein; rfaE bifunctional protein; PFAM: cytidylyltransferase; PfkB domain protein; KEGG: pca:Pcar_1282 putative ADP-heptose synthase; IMG reference gene:2503008548; PFAM: Cytidylyltransferase; pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain II; rfaE bifunctional protein, domain I; cytidyltransferase-related domain.
  
 0.967
Dalk_0045
PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: dol:Dole_1710 GHMP kinase; IMG reference gene:2503005740; PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain.
 
 
 0.954
Dalk_0826
PFAM: histidinol dehydrogenase; KEGG: sfu:Sfum_3299 histidinol dehydrogenase; IMG reference gene:2503006527; PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase.
  
 
 0.903
Dalk_0363
PFAM: glycosyl transferase family 9; KEGG: nis:NIS_1446 lipopolysaccharide heptosyltransferase; IMG reference gene:2503006060; PFAM: Glycosyltransferase family 9 (heptosyltransferase).
 
  
 0.894
Dalk_1807
PFAM: glycosyl transferase family 2; KEGG: lbf:LBF_4116 bifunctional glycosyltransferase/sugar pyrophosphorylase; IMG reference gene:2503007518; PFAM: Glycosyl transferase family 2.
  
 0.890
Dalk_0357
PFAM: glycosyl transferase family 9; KEGG: noc:Noc_0576 glycosyl transferase family protein; IMG reference gene:2503006054; PFAM: Glycosyltransferase family 9 (heptosyltransferase).
 
  
 0.865
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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