STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dalk_2933Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sfu:Sfum_0651 integral membrane sensor signal transduction histidine kinase; IMG reference gene:2503008659; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain. (571 aa)    
Predicted Functional Partners:
Dalk_2932
PFAM: response regulator receiver; KEGG: sfu:Sfum_0654 response regulator receiver protein; IMG reference gene:2503008658; PFAM: Response regulator receiver domain.
 
 
  0.945
Dalk_2936
PFAM: response regulator receiver; KEGG: dol:Dole_2331 response regulator receiver protein; IMG reference gene:2503008662; PFAM: Response regulator receiver domain.
 
  0.945
Dalk_0873
KEGG: hch:HCH_00809 signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; IMG reference gene:2503006574; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box.
  
0.921
Dalk_2935
KEGG: dol:Dole_2332 histidine kinase A domain-containing protein; IMG reference gene:2503008661.
 
     0.916
Dalk_2934
PFAM: response regulator receiver; KEGG: tye:THEYE_A0739 response regulator; IMG reference gene:2503008660; PFAM: Response regulator receiver domain.
 
 
  0.901
Dalk_4452
KEGG: rxy:Rxyl_2663 multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; IMG reference gene:2503010203; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Hpt domain; PAS fold; TIGRFAM: PAS domain S-box.
  
0.896
Dalk_2250
PFAM: response regulator receiver; KEGG: dol:Dole_1357 response regulator receiver protein; IMG reference gene:2503007970; PFAM: Response regulator receiver domain.
 
  0.879
Dalk_2931
TIGRFAM: sulfate transporter; PFAM: response regulator receiver; Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: dde:Dde_3641 sulfate permease; IMG reference gene:2503008657; PFAM: Response regulator receiver domain; Sulfate transporter family; STAS domain.
 
  
  0.873
Dalk_2244
PFAM: response regulator receiver; KEGG: dol:Dole_1357 response regulator receiver protein; IMG reference gene:2503007964; PFAM: Response regulator receiver domain.
 
  0.858
Dalk_3916
KEGG: ade:Adeh_4122 GAF sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; IMG reference gene:2503009660; PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box.
 
0.841
Your Current Organism:
Desulfatibacillum alkenivorans AK01
NCBI taxonomy Id: 439235
Other names: D. alkenivorans AK-01, Desulfatibacillum alkenivorans AK-01, Desulfatibacillum alkenivorans str. AK-01, Desulfatibacillum alkenivorans strain AK-01
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